|
Advanced Tissue Management (ATiM)
|
|
|
|
|
|
American National Center for Biotechnology Information (NCBI)
|
|
|
|
|
|
Bioconductor
|
|
|
|
|
Broad Institute Software
Including
Arachne,
Argo,
Conrad,
PLINK,
EIGENSTRAT,
Haploview,
Locusview,
Sweep,
Tagger,
GeneHunter,
MapMaker3,
GenePattern,
GSEA,
GeneCruiser,
ConnectivityMap
|
|
|
|
|
|
CLC Free Workbench
|
|
|
|
|
|
dotProject
|
|
|
|
|
Dr David Clayton's website
Including
SPLINK,
TRANSMIT,
PED2SPL,
GH2STAT and
SNPHAP
|
|
|
|
|
Dr David Reich's Laboratory
Including ANCESTRYMAP, EIGENSOFT and EIGENSTRAT.
|
|
|
|
|
|
Epi Info
|
|
|
|
|
ESPRESSO Power Calculator
|
|
|
|
|
|
European Bioinformatics Institute (EBI)
|
|
|
|
|
|
FreeMind
|
|
|
|
|
|
GeneSNPs
|
|
|
|
|
|
GeneStat
|
|
|
|
|
|
Genetic Association Database (GAD)
|
|
|
|
|
|
Genetic Power Calculator
|
|
|
|
|
|
Gonçalo's Software
|
|
|
|
|
HapMap
Including
genome browser and the
Encode Project.
|
|
|
|
|
|
KPlato
|
|
|
|
|
Matthews Stephens's website
Including BIMBAM, fastPHASE, HOTSPOTTER, PHASE and SCAT
|
|
|
|
|
|
The Obiba Project
|
|
|
|
|
|
Open Workbench
|
|
|
|
|
|
PEDSYS
|
|
|
|
|
|
Power and
Sample Size Calcultor (PS)
|
|
|
|
|
|
]project-open[
|
|
|
|
|
|
Progeny Anywhere
|
|
|
|
|
R
Including
StatLib - software and extensions for the S
(Splus), and R language.
|
|
|
|
|
Rockefeller University Linkage
Software
Including
Tagger,
Haploview,
ldSelect,
PLINK and
Structure
|
|
|
|
|
Rockefeller University Linkage
Software
Including
QUANTO,
TDTASP and
PBAT
|
|
|
|
|
Rockefeller University Linkage
Software
Including
Unphased,
PDT,
PLINK,
QTDT,
TDT-PC and
FBAT
|
|
|
|
|
|
SAIL
|
|
|
|
|
|
SAS Software for Distribution
|
|
|
|
|
|
SeattleSNPs
|
|
|
|
|
STATA power and sample size
Including Access to external utilities and services
that enhance the use of basic Stata
|
|
|
|
|
|
Tagzilla
|
|
|
|
|
|
Taskjuggler
|
|
|
|
|
University of California Santa Cruz (UCSC) Genome Bioinformatics
Including
In Silico PCR,
Proteome and
Genome Browsers.
|
|
|
|
|
